In silico prediction of the pharmacological potential of new 7-alkyl-8-hydrazine derivatives of 1,3-dimethylxanthine

Authors

DOI:

https://doi.org/10.14739/2409-2932.2024.3.308118

Keywords:

7,8-disubstituted theophyllines, in silico screening, SwissADME, pharmacological phenomena

Abstract

The development of new drug-like molecules based on 7-R-8-hydrazine derivatives of 1,3-dimethylxanthine is promising in view of the known pharmacological effect of theophylline and functional hydrazine derivatives. In silico methods make it possible to rationalize the synthesis and reduce the number of chemical compounds at the stage of virtual screening by eliminating potentially ineffective molecules.

The aim of the work was to carry out а virtual design and predictive evaluation of pharmacological activity of new 7-alkyl-8-hydrazine derivatives of 1,3-dimethylxanthine by in silico methods.

Materials and methods. To perform in silico prediction of the pharmacological potential of several new 7-alkyl-8-hydrazine derivatives of 1,3-dimethylxanthine, we used the online services. As 12 model compounds, we chose 12 derivatives of 5-(2-(1,3-dimethyl-2,6-dioxo-2,3,6,7-tetrahydro-1H-purin-8-yl)hydrazine)-5-phenylpentanoic acid with linear and branched alkyl substituents at the 7th position of the basic heterocycle: methyl-, ethyl-, n-propyl-, n-butyl, i-butyl, n-amyl, i-amyl, n-hexyl, n-heptyl, n-octyl, n-nonyl, n-decyl. The use of the freely available web tool SwissADME made it possible to calculate physicochemical parameters and to determine the drug-likeness properties of molecules. And other Internet platforms allowed to predict the spectrum of biological activity of the target compounds.

Results. In silico analysis of the pharmacological potential of model compounds was performed. Three biological actions (peripheral vasodilator, kidney function stimulant, lipoprotein lipase inhibitor) with high Pa values are predicted for all derivatives of the series. The ADME parameters of the molecules were evaluated and their potential drug-like properties were determined.

Conclusions. It was established that the extension of the alkyl substituent at the 7th position of the basic heterocycle should lead to a deterioration of the ADME parameters of the molecules, potentially reduce their oral bioavailability, but should not radically affect their biological activity profile. Compounds 1–3 and 5 are predicted to be orally bioavailable. They should be characterized by a wide spectrum of biological activity with the highest probability of vasodilator effect on peripheral vessels. In the future, it is advisable to carry out targeted synthesis of hit compounds and thorough in vitro, in vivo studies, and for compounds with violated physicochemical criteria – structural optimization of molecules in order to find a lead compound.

Author Biographies

L. M. Mosula, Ivan Horbachevsky Ternopil National Medical University of the Ministry of Health of Ukraine

PhD, Associate Professor of the Department of Pharmaceutical Chemistry

V. S. Mosula, Ivan Horbachevsky Ternopil National Medical University of the Ministry of Health of Ukraine

student of the Faculty of Medicine

D. B. Korobko, Ivan Horbachevsky Ternopil National Medical University of the Ministry of Health of Ukraine

PhD, Associate Professor of the Department of Pharmaceutical Chemistry

References

Sanjay B, Hardik B, Gayatri P, Jitubhai M. Unveiling Innovative Purine Dione Derivatives: A Comprehensive Study for Advancing Medicinal Applications. IRJMS. 2024;5(1):516-34. doi: https://doi.org/10.47857/irjms.2024.v05i01.0262

Ding Q, Xu YM, Lau ATY. The Epigenetic Effects of Coffee. Molecules. 2023;28(4):1770. doi: https://doi.org/10.3390/molecules28041770

Singh N, Shreshtha AK, Thakur MS, Patra S. Xanthine scaffold: scope and potential in drug development. Heliyon. 2018;4(10):e00829. doi: https://doi.org/10.1016/j.heliyon.2018.e00829

Petrucci R, Feroci M, Mattiello L, Chiarotto I. Xanthine Scaffold: Available Synthesis Routes to Deliver Diversity by Derivatization. Mini-Reviews in Organic Chemistry. 2021;18(1):27-42. doi: https://doi.org/10.2174/1570193X17999200507103141

Monteiro JP. Alves MG, Oliveira PF, Silva BM. Structure-bioactivity relationships of methylxanthines: trying to make sense of all the promises and the drawbacks. Molecules. 2016;21(8):974. doi: https://doi.org/10.3390/molecules21080974

Kapri A, Gupta N, Nain S. Recent Advances in the Synthesis of Xanthines: A Short Review. Scientifica. 2022;2022(1):8239931. doi: https://doi.org/10.1155/2022/8239931

El-Kakyoubi S, Agili F. Synthesis, In Silico Prediction and In Vitro Evaluation of Antitumor Activities of Novel Pyrido[2,3-d]pyrimidine, Xanthine and Lumazine Derivatives. Molecules. 2020;25(21):5205. doi: https://doi.org/10.3390/molecules25215205

Lee D, Lee S, Liu KH, Bae JS, Baek DJ, Lee T. Solid-Phase Synthesis of 1,3,7,8-Tetrasubstituted Xanthine Derivatives on Traceless Solid Support. ACS Comb Sci. 2016;18(1):70-4. doi: https://doi.org/10.1021/acscombsci.5b00148

Korobko D. Synthesis of the row of new functional derivatives of 7-arylalkyl-8-hydrazine theophyllines. ScienceRise. 2016;20(3/4):39-45. doi: https://doi.org/10.15587/2313-8416.2016.65209

SwissADME [Internet]. www.swissadme.ch. Available from: http://www.swissadme.ch

Gurjar VK, Pal D. Design, in silico studies, and synthesis of new 1,8-naphthyridine-3-carboxylic acid analogues and evaluation of their H1R antagonism effects. RSC Adv. 2020;10(23):13907-21. doi: https://doi.org/10.1039/D0RA00746C

Additional Files

Published

2024-11-08

How to Cite

1.
Mosula LM, Mosula VS, Korobko DB. In silico prediction of the pharmacological potential of new 7-alkyl-8-hydrazine derivatives of 1,3-dimethylxanthine. Current issues in pharmacy and medicine: science and practice [Internet]. 2024Nov.8 [cited 2024Nov.21];17(3):244-52. Available from: http://pharmed.zsmu.edu.ua/article/view/308118